Good news:
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The first issue regarding the cloud problem is just a refresh thing. When you import the commands via cloud, the custom commands and the layout is not automatically loaded (the same as my other issue reported here but through cloud import instead of the API workflow). As a workaround, restarting Yatse shows everything as expected
NOTE 1: Importing from a file automatically refreshes everything
NOTE 2: I always delete any existing custom command - e.g. the default ones - before importing, maybe it is needed to make the issue happen. -
The second issue regarding the combined commands not properly exported and/or imported is still there, and it happens when exp/imp from a file and also when doing so from the cloud (after restarting Yatse).
I am going to send you the logs via a private message.